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IBL Tropical Forest Research Program
Microbiology
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One of the
long-term goals of our research is to begin to
understand the relationship between soil processes
and the identity of the organisms carrying out
those processes. Current measurements of biogeochemical
variables (e.g., soil CO2 efflux) most often represent
the net effect of the processes carried out by
a suite of microorganisms. However relationships
between the structure of the soil microbial community
and specific biogeochemical processes are not
well understood, especially in tropical ecosystems.
Thus, one primary objective of our work is to
study linkages between microbial community composition
and specific biogeochemical processes. In collaboration
with Dr.
Diana Nemergut at INSTAAR, we are using molecular
microbiological techniques to attempt to link
the composition of the microbial community (i.e.,
phylogeny) to a specific functions (e.g., dissolved
organic carbon (DOC) decomposition). Previous
data from our site in Costa Rica suggest that
both short term (diurnal) and long term (seasonal
annual) changes in soil resource availability
drive changes in microbial community structure
and function. Such information is critical for
assessing the role of soil diversity in regulating
ecosystem function.
To promote interdisciplinary research linking
biogeochemistry and microbiology, Dr. Nemergut
has established a new microbiology and DNA lab
at INSTAAR, and in collaboration with her, our
group is helping to develop the Center of Microbial
Biogeochemistry and Evolution (COMBE). Both this
new lab and the new program will provide valuable
resources for current and future students interested
in developing research that combines biogeochemistry
and microbiology.
Another objective of our research is to begin
to investigate how differences in tree diversity
(reflected as differences in plant leaf chemistry)
regulate soil microbial community structure and
function. Our previous data suggest substantial
between-species differences in the C and nutrient
stoichiometry of litter leachate, and that variations
in the nutrient content of leach dissolved organic
matter (DOM) drive differences in the proportion
of that DOM that is lost as CO2. We believe such
differences occur via changes in microbial community
composition resulting from differences in litter
chemistry.
To begin to address the links between above- and
belowground species composition, we have established
a set of litter manipulation plots in which we
control litter composition. We are using several
species that vary in C, N and P content, and are
assessing the effect of tree diversity on DOM
production and chemistry, belowground respiration
and rates of nutrient cycling, and belowground
community composition. This experiment is a useful
first step in determining the connections between
plant and soil diversity, and will provide insight
into how belowground diversity regulates belowground
ecosystem function.